ProtoReasoner: Prototype-Guided Reinforcement Learning for Interpretable and Backdoor-Resistant Large Language Model Reasoning Systems

Authors

  • Gnish A. Pood Department of Computer Science and Engineering, University at Buffalo, Buffalo, NY, USA. Author

Keywords:

large language models, reinforcement learning, interpretability, backdoor defense, prototype learning, reasoning systems, trustworthy AI, socio-technical infrastructure

Abstract

Large language models have demonstrated remarkable reasoning capabilities, yet their deployment in high-stakes domains is hindered by two persistent challenges: a lack of interpretability in their decision-making processes and vulnerability to backdoor attacks that can covertly manipulate model behavior. Existing approaches to enhance reasoning, such as reinforcement learning from human feedback, often improve performance at the cost of transparency and security. This paper introduces ProtoReasoner, a prototype-guided reinforcement learning framework designed to produce interpretable and backdoor-resistant reasoning systems built upon large language models. ProtoReasoner integrates a prototype-based representation layer into the reinforcement learning loop, enabling the model to ground its reasoning steps on learned, human-interpretable prototypes that capture salient patterns in the input space. These prototypes serve a dual purpose: they provide local and global explanations for model decisions, and they act as semantic anchors that disrupt the injection and activation of backdoor triggers. We present the architectural principles of ProtoReasoner, including the design of the prototype memory bank, the reinforcement learning objective that balances task performance with prototype fidelity, and the inference-time protocol for prototype-based reasoning. A detailed analysis of backdoor resistance demonstrates how prototype consistency forces backdoor triggers to conflict with natural prototypes, making attacks detectable and ineffective. We further discuss system-level considerations such as computational overhead, scalability to large state spaces, robustness under distribution shift, fairness in prototype selection, and the governance implications of deploying interpretable reasoning agents. ProtoReasoner represents a step toward trustworthy large language model systems that can be audited, certified, and deployed in safety-critical applications.

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Published

2026-05-22

How to Cite

ProtoReasoner: Prototype-Guided Reinforcement Learning for Interpretable and Backdoor-Resistant Large Language Model Reasoning Systems. (2026). Journal of Data Intelligence and AI Systems, 1(1). https://www.jdataai.org/index.php/home/article/view/28